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mammaprint, a microarray gene expression analysis  (Agendia BV)

 
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    Agendia BV mammaprint, a microarray gene expression analysis
    Mammaprint, A Microarray Gene Expression Analysis, supplied by Agendia BV, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/expression+microarray+analysis/mammaprint+assay/pm39602125-66-0-9
    Average 90 stars, based on 1 article reviews
    mammaprint, a microarray gene expression analysis - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Microarray:

    Article Title: Association between Obesity, Race or Ethnicity, and Luminal Subtypes of Breast Cancer
    Article Snippet: .. MammaPrint and BluePrint are based on microarray gene expression analysis [ , ] performed at the Agendia Laboratory (Irvine, CA, USA). ..

    Article Title: Dissecting Biological Risk Using Genomic Assays-Implications for Extended Endocrine Therapy and Beyond.
    Article Snippet: .. MammaPrint, a microarray gene expression analysis, was performed at Agendia Inc.38-41 Samples contained 30% tumor cells or greater, and extracted RNA from formalin-fixed paraffin-embedded tissue was converted to cDNA, amplified, labeled, and hybridized onto Agendia’s diagnostic arrays (custom-designed, Agilent Technologies). ..

    Gene Expression:

    Article Title: Association between Obesity, Race or Ethnicity, and Luminal Subtypes of Breast Cancer
    Article Snippet: .. MammaPrint and BluePrint are based on microarray gene expression analysis [ , ] performed at the Agendia Laboratory (Irvine, CA, USA). ..

    Article Title: Dissecting Biological Risk Using Genomic Assays-Implications for Extended Endocrine Therapy and Beyond.
    Article Snippet: .. MammaPrint, a microarray gene expression analysis, was performed at Agendia Inc.38-41 Samples contained 30% tumor cells or greater, and extracted RNA from formalin-fixed paraffin-embedded tissue was converted to cDNA, amplified, labeled, and hybridized onto Agendia’s diagnostic arrays (custom-designed, Agilent Technologies). ..

    other:

    Article Title: ESMO Congress: Much Focus on Importance of Patient Selection by Biomarker for Targeted Therapy
    Article Snippet: pean Society for Medical Oncology (ESMO) Congress featured numerous clinical trials of personalized medicine where so-called “companion diagnostics” will be used alongside expensive targeted therapies to increase the likelihood of benefit for individual patients.. The search for biomarkers predictive of response to specific therapeutics is intensifying, especially in Europe, where high costs have restricted access to treatment.. Several of these trials were selected for ESMO’s Presidential Symposium and Conference Highlights sessions and were flagged for their potential to change practice.

    Formalin-fixed Paraffin-Embedded:

    Article Title: Dissecting Biological Risk Using Genomic Assays-Implications for Extended Endocrine Therapy and Beyond.
    Article Snippet: .. MammaPrint, a microarray gene expression analysis, was performed at Agendia Inc.38-41 Samples contained 30% tumor cells or greater, and extracted RNA from formalin-fixed paraffin-embedded tissue was converted to cDNA, amplified, labeled, and hybridized onto Agendia’s diagnostic arrays (custom-designed, Agilent Technologies). ..

    Amplification:

    Article Title: Dissecting Biological Risk Using Genomic Assays-Implications for Extended Endocrine Therapy and Beyond.
    Article Snippet: .. MammaPrint, a microarray gene expression analysis, was performed at Agendia Inc.38-41 Samples contained 30% tumor cells or greater, and extracted RNA from formalin-fixed paraffin-embedded tissue was converted to cDNA, amplified, labeled, and hybridized onto Agendia’s diagnostic arrays (custom-designed, Agilent Technologies). ..

    Labeling:

    Article Title: Dissecting Biological Risk Using Genomic Assays-Implications for Extended Endocrine Therapy and Beyond.
    Article Snippet: .. MammaPrint, a microarray gene expression analysis, was performed at Agendia Inc.38-41 Samples contained 30% tumor cells or greater, and extracted RNA from formalin-fixed paraffin-embedded tissue was converted to cDNA, amplified, labeled, and hybridized onto Agendia’s diagnostic arrays (custom-designed, Agilent Technologies). ..

    Diagnostic Assay:

    Article Title: Dissecting Biological Risk Using Genomic Assays-Implications for Extended Endocrine Therapy and Beyond.
    Article Snippet: .. MammaPrint, a microarray gene expression analysis, was performed at Agendia Inc.38-41 Samples contained 30% tumor cells or greater, and extracted RNA from formalin-fixed paraffin-embedded tissue was converted to cDNA, amplified, labeled, and hybridized onto Agendia’s diagnostic arrays (custom-designed, Agilent Technologies). ..



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    NAC61 expression analysis. (A) NAC61 expression behavior in grapevine organs throughout development (bar plot) and compared in the heatmap (logarithmic value) with that of NAC60 and NAC33. The data were retrieved from the atlas transcriptomic dataset of cv. ‘Corvina’ ( Fasoli et al ., 2012 ). Each value represents the mean ±SD of three biological replicates. (B) Correlation between NAC61 expression level and sugar content in grape berries sampled from fruit set to maturity in cv. ‘Cabernet Sauvignon’ and cv. ‘Pinot noir’ ( Fasoli et al ., 2018 ). The black line represents the trend of the averaged values of the two varieties. The R 2 values shown correspond to the fitting of different polynomial regressions to each corresponding group of samples (orange for cv. ‘Cabernet Sauvignon’ samples, blue for cv. ‘Pinot noir’ samples, and black for the entire set of samples). (C) Correlation between NAC61 expression level and sugar content in grape berries sampled during post-harvest dehydration in six different varieties ( Zenoni et al ., 2016 ). (D) Correlation between NAC61 expression level and berry weight loss in cv. ‘Corvina’ berries sampled during traditional long and forced short post-harvest dehydration processes ( Zenoni et al ., 2020 ). Expression values were determined by <t>microarray</t> analysis and each value represents the mean ±SD from three biological replicates. (E) NAC61 GCNs based on berry, leaf, and tissue-independent (TI) datasets. Left, Venn diagram showing exclusive and shared genes based on the three datasets; right, three-dimensional plot of co-expressed genes in which NAC, WRKY, and ZIP family members already described as having involvement in berry ripening and/or stress responses are indicated.
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    Image Search Results


    NAC61 expression analysis. (A) NAC61 expression behavior in grapevine organs throughout development (bar plot) and compared in the heatmap (logarithmic value) with that of NAC60 and NAC33. The data were retrieved from the atlas transcriptomic dataset of cv. ‘Corvina’ ( Fasoli et al ., 2012 ). Each value represents the mean ±SD of three biological replicates. (B) Correlation between NAC61 expression level and sugar content in grape berries sampled from fruit set to maturity in cv. ‘Cabernet Sauvignon’ and cv. ‘Pinot noir’ ( Fasoli et al ., 2018 ). The black line represents the trend of the averaged values of the two varieties. The R 2 values shown correspond to the fitting of different polynomial regressions to each corresponding group of samples (orange for cv. ‘Cabernet Sauvignon’ samples, blue for cv. ‘Pinot noir’ samples, and black for the entire set of samples). (C) Correlation between NAC61 expression level and sugar content in grape berries sampled during post-harvest dehydration in six different varieties ( Zenoni et al ., 2016 ). (D) Correlation between NAC61 expression level and berry weight loss in cv. ‘Corvina’ berries sampled during traditional long and forced short post-harvest dehydration processes ( Zenoni et al ., 2020 ). Expression values were determined by microarray analysis and each value represents the mean ±SD from three biological replicates. (E) NAC61 GCNs based on berry, leaf, and tissue-independent (TI) datasets. Left, Venn diagram showing exclusive and shared genes based on the three datasets; right, three-dimensional plot of co-expressed genes in which NAC, WRKY, and ZIP family members already described as having involvement in berry ripening and/or stress responses are indicated.

    Journal: Journal of Experimental Botany

    Article Title: NAC61 regulates late- and post-ripening osmotic, oxidative, and biotic stress responses in grapevine

    doi: 10.1093/jxb/erad507

    Figure Lengend Snippet: NAC61 expression analysis. (A) NAC61 expression behavior in grapevine organs throughout development (bar plot) and compared in the heatmap (logarithmic value) with that of NAC60 and NAC33. The data were retrieved from the atlas transcriptomic dataset of cv. ‘Corvina’ ( Fasoli et al ., 2012 ). Each value represents the mean ±SD of three biological replicates. (B) Correlation between NAC61 expression level and sugar content in grape berries sampled from fruit set to maturity in cv. ‘Cabernet Sauvignon’ and cv. ‘Pinot noir’ ( Fasoli et al ., 2018 ). The black line represents the trend of the averaged values of the two varieties. The R 2 values shown correspond to the fitting of different polynomial regressions to each corresponding group of samples (orange for cv. ‘Cabernet Sauvignon’ samples, blue for cv. ‘Pinot noir’ samples, and black for the entire set of samples). (C) Correlation between NAC61 expression level and sugar content in grape berries sampled during post-harvest dehydration in six different varieties ( Zenoni et al ., 2016 ). (D) Correlation between NAC61 expression level and berry weight loss in cv. ‘Corvina’ berries sampled during traditional long and forced short post-harvest dehydration processes ( Zenoni et al ., 2020 ). Expression values were determined by microarray analysis and each value represents the mean ±SD from three biological replicates. (E) NAC61 GCNs based on berry, leaf, and tissue-independent (TI) datasets. Left, Venn diagram showing exclusive and shared genes based on the three datasets; right, three-dimensional plot of co-expressed genes in which NAC, WRKY, and ZIP family members already described as having involvement in berry ripening and/or stress responses are indicated.

    Article Snippet: The cDNA synthesis, labelling, hybridization, and washing steps were performed according to the Agilent Microarray-Based Gene Expression Analysis Guide ( https://www.agilent.com/cs/library/usermanuals/Public/G4140-90040_GeneExpression_OneColor_6.9.pdf ).

    Techniques: Expressing, Microarray